Domenico Simone | lnu.se

My research groups

Linnaeus University Centre for Ecology and Evolution in Microbial model Systems (EEMiS) EEMiS is a centre for research excellence studying ecological and evolutionary interactions from land to sea.
Systems Biology of Microorganisms Systems biology is the study of the interactions between the components of biological systems

Publications

Article in journal (Refereed)

Mehrshad, M., Lopez-Fernandez, M., Sundh, J., Bell, E., Simone, D., et al. (2021). Energy efficiency and biological interactions define the core microbiome of deep oligotrophic groundwater. Nature Communications. 12 (1).
Status: Published
Holmfeldt, K., Nilsson, E., Simone, D., Lopez-Fernandez, M., Wu, X., et al. (2021). The Fennoscandian Shield deep terrestrial virosphere suggests slow motion 'boom and burst' cycles. Communications Biology. 4 (1).
Status: Published
Lopez-Fernandez, M., Broman, E., Simone, D., Bertilsson, S., Dopson, M. (2019). Statistical Analysis of Community RNA Transcripts between Organic Carbon and Geogas-Fed Continental Deep Biosphere Groundwaters. mBio. 10 (4). 1-6.
Status: Published
Lopez-Fernandez, M., Simone, D., Wu, X., Soler, L., Nilsson, E., et al. (2018). Metatranscriptomes Reveal That All Three Domains of Life Are Active but Are Dominated by Bacteria in the Fennoscandian Crystalline Granitic Continental Deep Biosphere. mBio. 9 (6).
Status: Published
Ni, G., Simone, D., Palma, D., Broman, E., Wu, X., et al. (2018). A novel inorganic sulfur compound metabolizing Ferroplasma-like population is suggested to mediate extracellular electron transfer. Frontiers in Microbiology.
Status: Published
Ni, G., Canizales, S., Broman, E., Simone, D., Palwai, V.R., et al. (2018). Microbial Community and Metabolic Activity in Thiocyanate Degrading Low Temperature Microbial Fuel Cells. Frontiers in Microbiology. 9.
Status: Published
Clima, R., Preste, R., Calabrese, C., Diroma, M.A., Santorsola, M., et al. (2017). HmtDB 2016 : data update, a better performing query system and human mitochondrial DNA haplogroup predictor. Nucleic Acids Research. 45 (D1). D698-D706.
Status: Published

Manuscript (preprint) (Other academic)

Holmfeldt, K., Nilsson, E., Simone, D., Lopez-Fernandez, M., Wu, X., et al. The deep terrestrial virosphere.